Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906123.1_cds_XP_016456339.1_50181
CDS Infomation

[gene=LOC107780328] [db_xref=GeneID:107780328] [protein=DExH-box ATP-dependent RNA helicase DExH14-like] [protein_id=XP_016456339.1] [location=complement(join(3351..3473,3553..3705,3853..3918,4380..4541,4706..4822,4893..4964,5048..5107,5234..5350,7767..8069,8155..8259,8697..8762,8881..9331,9619..9787,10148..10209,10298..10404))] [gbkey=CDS]
Sequence

ATGTTGTTTCAACTGCCTCGCCTGACCAATGCTCTCAGAGAACCATTCGACGTCGATCAA
GCTTACCTTCACCGGAAAGCAATTCTCCAAAATCTCAACTCTCGCAGTACTGCAACTTCA
CTTGAAGAATCAAAACTTGCTCGAAAGATTGTATATCAATGGGACCAAGCTTCTCCTGAG
TTGCGGCAAGCGTACAAGCAGTTTGTTGGGGCAGTGGTTGAGTTGATGAAGGGTGAGGTT
GTGTCAGAGGAGTTTAGGGAGGTGGCATTCAATGTTTATAGGCTTTTCACCGGGACAGTG
GTGGAGGATGAGGAACACAGGAGTATTGCTGAGAAGAAGCTAGATTTGCAAAAACTCGTG
GGCTATGCAGTTTCGGACTCATTACTATCGAGAGTTGCTTCCTTAGCACAAAGATTGTAC
GAATTGCAGAATTATCACCCTGGAAATGAGACAGTCTCTTTACAAGAAATGTCTAATGGA
ACCACTGATGAAGTGGAATTTGGCTCGGACCTTGTCTTTAGACCTCCCGCGCGATTCTTA
ATTGATGTTTCTTTGGAAGATTCTGATTTTCTTGTTGAGCAGGATGATGCACCTTCTTCA
AGTCATGAATCACAGTACGATCATGGCTCCTCAAATTTTAGAGAATCTGTATCTGGTGTA
AATTTTGATTTAAGCTGGTTAAGAGATGCCTGTGATAAGATAGTTAGAGGTAATACTTCG
CAGCTTCCTCGAGATGAACTGGCAATGGCCATATGCCGCGTACTTGATTCTGAGAAACCA
GGTGATGAGATAGCTGGCGATTTGCTTGACCTTGTTGGTGATGGTGCATTTGAAACAGTT
CAGGATCTTATCATGCACAGAAAGGAAATTGTTGATGCAGTCCATCATGGACTACATGCA
CTAAAAGCTGACAAGATGTCTCCAGGGGGACAATCACGCACACCTAGTTATGCTGTTCAG
GTAACTGTTCAAACTGAGTCTGAGCGGCAAATTGACAAACTTCGTCGGAAGGAAGAAAGA
AAGCATAGACGAGGAACAAATAATGGGGTTGAGGATGATTTGTCTGCCGTGAGTTTTAGT
TCTTTACTTCATGCAAGTGAGAAGAAAAACATATTTGAGGACCTCATTGGTCATGGTGAA
GGGCCAAACACCTTAGGTCCTACAGCCCTTCCTCAAGGAACTATCAGAAAGCACTACAAA
GGATATGAAGAAGTCATTATCCCTCCAACACCAACTGCATCTATGAAACCTGGGGAGAGA
CTGATTGAGATAAAGGAGCTAGACGATTTTGCACAAACAGCTTTCCATGGCTACAAGAGT
CTTAACCGTATTCAGAGCAGAATTTACCATACTACTTATAATAGCAACGAAAACATACTA
GTATGTGCTCCCACTGGGGCTGGGAAAACAAACATAGCTATGATTGCTATTCTACATGAG
ATTAAAAATCACTTTAGAGATGGTTACTTGCATAAGGATGAATTCAAGATAGTCTATGTT
GCTCCTATGAAGGCATTAGCTGCAGAGGTCACATCAACTTTCAGTCACCGGTTGTCTCCA
CTTAATGTAACTGTGAGAGAACTTACTGGAGACATGCAGCTTTCTAAGAATGAGCTTGAG
GAAACACAGATGATAGTGACAACGCCTGAAAAGTGGGATGTTATTACTCGTAAAAGCAGT
GACATGTCACTCTCAATGCTGGTGAAGCTACTTATCATTGATGAAGTCCATTTGCTAAAT
GATGATAGAGGCCCTGTAATAGAAGCATTAGTAGCCCGTACACTTCGTCAGGTGGAGTCT
ACACAGTCTATGATAAGGATAGTGGGCCTTTCAGCCACTTTACCCAACTATTTGGAGGTT
GCACAGTTTCTAAGGGTGAATCCGGATACAGGTTTATTTTTCTTTGATTCAAGCTACCGT
CCGGTACCTCTTGCACAACAGTATATTGGTATTAGTGAGCATAATTTTTTAGCCCGCAAT
GAACTTCTTAATGAGATATGCTACAATAAGGTTGTTGATTCCTTAAAACAAGGGCATCAG
GCTATGGTATTTGTCCATTCACGTAAGGACACGGTGAAAACGGCTGATAAGTTGGTAAGT
TTTCTATCTGGATATGATTTAATGCGCAGTTAA

Peptide Sequence

PEP ID

XP_016456339.1
PEP Infomation

PREDICTED: DExH-box ATP-dependent RNA helicase DExH14-like [Nicotiana tabacum]
Sequence

MLFQLPRLTNALREPFDVDQAYLHRKAILQNLNSRSTATSLEESKLARKIVYQWDQASPE
LRQAYKQFVGAVVELMKGEVVSEEFREVAFNVYRLFTGTVVEDEEHRSIAEKKLDLQKLV
GYAVSDSLLSRVASLAQRLYELQNYHPGNETVSLQEMSNGTTDEVEFGSDLVFRPPARFL
IDVSLEDSDFLVEQDDAPSSSHESQYDHGSSNFRESVSGVNFDLSWLRDACDKIVRGNTS
QLPRDELAMAICRVLDSEKPGDEIAGDLLDLVGDGAFETVQDLIMHRKEIVDAVHHGLHA
LKADKMSPGGQSRTPSYAVQVTVQTESERQIDKLRRKEERKHRRGTNNGVEDDLSAVSFS
SLLHASEKKNIFEDLIGHGEGPNTLGPTALPQGTIRKHYKGYEEVIIPPTPTASMKPGER
LIEIKELDDFAQTAFHGYKSLNRIQSRIYHTTYNSNENILVCAPTGAGKTNIAMIAILHE
IKNHFRDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNVTVRELTGDMQLSKNELE
ETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVES
TQSMIRIVGLSATLPNYLEVAQFLRVNPDTGLFFFDSSYRPVPLAQQYIGISEHNFLARN
ELLNEICYNKVVDSLKQGHQAMVFVHSRKDTVKTADKLVSFLSGYDLMRS

Transcript Sequence

Gene sequence data has not been registered.